sccross.models.sccrossΒΆ

Functions

configure_dataset

Configure dataset for model training

gen_tf_gene_table

Adapted from: Author: Jun Ding Project: SCDIFF2 Ref: Ding, J., Aronow, B.

getGeneSetMatrix

Adapted from: Author: Jun Ding Project: SCDIFF2 Ref: Ding, J., Aronow, B.

normalize_sparse

Row-normalize sparse matrix

select_decoder

Select decoder architecture

select_encoder

Select encoder architecture

Classes

AnnDataset

Dataset for anndata.AnnData objects with partial pairing support.

AnnDataset_gs

CROSS

SCCROSS

SCCROSSModel

SCCROSSTrainer