sccross.models.sccross.SCCROSSModel.generate_augment

SCCROSSModel.generate_augment(key, adata, batch_size=128)[source]

Generate augmented single cell omic data

Parameters

  • key (str) – Domain key

  • adata (AnnData) – Input dataset

  • batch_size (int) – Size of minibatches

Return type

ndarray

Returns

data_embedding – Data (cell) embedding with shape \(n_{cell} \times n_{dim}\)